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◀ domain architecture  ·  operons  ·  ❔ guide
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Swg_02387

smpp Syntrophomonas wolfei subsp. wolfei Goettingen
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
DNA-directed RNA polymerase subunit beta'
Gene
rpoC
Location
NC_008346.1:2,670,268–2,673,813 (−)   1181 aa
Keys
gbid 57539   gene_oid 638139221  

Domain architecture

Pfam domain
Pfam signature: pfam04997,pfam00623,pfam00623,pfam04983,pfam05000,pfam04998,pfam04998

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

3 proteins across 3 genomes share architecture group #1268  pfam00623,pfam00623,pfam04983,pfam04997,pfam04998,pfam04998,pfam05000

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02387 ◀ 1181 pfam04997,pfam00623,pfam00623,pfam04983,pfam05000,pfam04998,pfam04998
Syntrophomonas wolfei saponavida / SD2 Sws_00948 1169 pfam04997,pfam00623,pfam00623,pfam04983,pfam05000,pfam04998,pfam04998
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02745 1181 pfam04997,pfam00623,pfam00623,pfam04983,pfam05000,pfam04998,pfam04998
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