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◀ domain architecture  ·  operons  ·  ❔ guide
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Sws_00948

smpp Syntrophomonas wolfei saponavida
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
DNA-directed RNA polymerase subunit beta'
Gene
rpoC
Location
NZ_CM161535.1:1,005,650–1,009,159 (−)   1169 aa
Keys
gbid 1718639   gene_oid 8099422815  

Domain architecture

Pfam domain
Pfam signature: pfam04997,pfam00623,pfam00623,pfam04983,pfam05000,pfam04998,pfam04998

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

3 proteins across 3 genomes share architecture group #1268  pfam00623,pfam00623,pfam04983,pfam04997,pfam04998,pfam04998,pfam05000

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei saponavida / SD2 Sws_00948 ◀ 1169 pfam04997,pfam00623,pfam00623,pfam04983,pfam05000,pfam04998,pfam04998
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02745 1181 pfam04997,pfam00623,pfam00623,pfam04983,pfam05000,pfam04998,pfam04998
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02387 1181 pfam04997,pfam00623,pfam00623,pfam04983,pfam05000,pfam04998,pfam04998
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