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◀ domain architecture  ·  operons  ·  ❔ guide
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Swm_02745

smpp Syntrophomonas wolfei methylbutyratica 4J5
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
DNA-directed RNA polymerase subunit beta'
Gene
rpoC
Location
NZ_CM161534.1:3,010,746–3,014,291 (−)   1181 aa
Keys
gbid 939965   gene_oid 8108584991  

Domain architecture

Pfam domain
Pfam signature: pfam04997,pfam00623,pfam00623,pfam04983,pfam05000,pfam04998,pfam04998

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

3 proteins across 3 genomes share architecture group #1268  pfam00623,pfam00623,pfam04983,pfam04997,pfam04998,pfam04998,pfam05000

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02745 ◀ 1181 pfam04997,pfam00623,pfam00623,pfam04983,pfam05000,pfam04998,pfam04998
Syntrophomonas wolfei saponavida / SD2 Sws_00948 1169 pfam04997,pfam00623,pfam00623,pfam04983,pfam05000,pfam04998,pfam04998
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02387 1181 pfam04997,pfam00623,pfam00623,pfam04983,pfam05000,pfam04998,pfam04998
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