Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Sesp_00166

smpp Syntrophomonas erecta sporosyntropha Sespor
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
Gene
rsmB
Location
NZ_AP042459.1:179,409–180,794 (−)   461 aa
Keys
gbid 1574700   gene_oid 8099419431  

Domain architecture

Pfam domain
Pfam signature: pfam01029,pfam22458,pfam01189

Putative operon (same contig + strand, gap ≤ 50 bp)

Sesp_00161 Sesp_00162 Sesp_00163 Sesp_00164 Sesp_00165 Sesp_00166 ◀ Sesp_00167 Sesp_00168   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

6 proteins across 6 genomes share architecture group #1563  pfam01029,pfam01189,pfam22458

GenomeLocusaaSP/TMPfam order
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00166 ◀ 461 pfam01029,pfam22458,pfam01189
Syntrophomonas curvata DSM15682 / GL#14 Scur_01606 457 pfam01029,pfam22458,pfam01189
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00603 461 pfam01029,pfam22458,pfam01189
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01111 460 pfam01029,pfam22458,pfam01189
Syntrophomonas wolfei saponavida / SD2 Sws_02575 470 pfam01029,pfam22458,pfam01189
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01378 459 pfam01029,pfam22458,pfam01189
↑ Top




v1.00 @copyright 2026 UCLA