Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Sesp_00513

smpp Syntrophomonas erecta sporosyntropha Sespor
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
TIGR03960 family B12-binding radical SAM protein
Gene
—
Location
NZ_AP042459.1:584,614–586,446 (−)   610 aa
Keys
gbid 1575055   gene_oid 8099419815  

Domain architecture

Pfam domain
Pfam signature: pfam19864,pfam04055

Putative operon (same contig + strand, gap ≤ 50 bp)

Sesp_00511 Sesp_00512 Sesp_00513 ◀   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

6 proteins across 6 genomes share architecture group #2114  pfam04055,pfam19864

GenomeLocusaaSP/TMPfam order
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00513 ◀ 610 pfam19864,pfam04055
Syntrophomonas curvata DSM15682 / GL#14 Scur_02118 617 pfam19864,pfam04055
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00258 610 pfam19864,pfam04055
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00080 620 pfam19864,pfam04055
Syntrophomonas wolfei saponavida / SD2 Sws_01948 629 pfam19864,pfam04055
Syntrophomonas zehnderi OL-4 Szehn Szeh_01834 628 pfam19864,pfam04055
↑ Top




v1.00 @copyright 2026 UCLA