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◀ domain architecture  ·  operons  ·  ❔ guide
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Sesp_00866

smpp Syntrophomonas erecta sporosyntropha Sespor
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
30S ribosomal protein S4
Gene
rpsD
Location
NZ_AP042459.1:966,612–967,241 (−)   209 aa
Keys
gbid 1575414   gene_oid 8099420194  

Domain architecture

Pfam domain
Pfam signature: pfam00163,pfam01479

Putative operon (same contig + strand, gap ≤ 50 bp)

Sesp_00861 Sesp_00862 Sesp_00863 Sesp_00864 Sesp_00865 Sesp_00866 ◀ Sesp_00867 Sesp_00868 Sesp_00869 Sesp_00870 Sesp_00871 Sesp_00872 Sesp_00873 Sesp_00874 Sesp_00875 Sesp_00876 Sesp_00877 Sesp_00878 Sesp_00879 Sesp_00880 Sesp_00881 Sesp_00882 Sesp_00883 Sesp_00884 Sesp_00885   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

7 proteins across 7 genomes share architecture group #1239  pfam00163,pfam01479

GenomeLocusaaSP/TMPfam order
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00866 ◀ 209 pfam00163,pfam01479
Syntrophomonas curvata DSM15682 / GL#14 Scur_02686 209 pfam00163,pfam01479
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02339 209 pfam00163,pfam01479
Syntrophomonas palmitatica JCM14374 Spalm Spalm_02338 209 pfam00163,pfam01479
Syntrophomonas wolfei saponavida / SD2 Sws_00914 209 pfam00163,pfam01479
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02710 209 pfam00163,pfam01479
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02352 209 pfam00163,pfam01479
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