Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Sesp_01778

smpp Syntrophomonas erecta sporosyntropha Sespor
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
GDP-mannose 4,6-dehydratase
Gene
gmd
Location
NZ_AP042459.1:1,897,328–1,898,377 (+)   349 aa
Keys
gbid 1576317   gene_oid 8099421167  

Domain architecture

Pfam domain
Pfam signature: pfam16363

Putative operon (same contig + strand, gap ≤ 50 bp)

Sesp_01776 Sesp_01777 Sesp_01778 ◀ Sesp_01779 Sesp_01780 Sesp_01781   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

17 proteins across 6 genomes share architecture group #445  pfam16363

GenomeLocusaaSP/TMPfam order
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00570 332 pfam16363
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01754 330 pfam16363
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01763 355 pfam16363
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01778 ◀ 349 pfam16363
Syntrophomonas curvata DSM15682 / GL#14 Scur_01032 359 pfam16363
Syntrophomonas curvata DSM15682 / GL#14 Scur_02084 367 pfam16363
Syntrophomonas curvata DSM15682 / GL#14 Scur_02096 336 pfam16363
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00201 332 pfam16363
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01549 349 pfam16363
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01564 355 pfam16363
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01573 330 pfam16363
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00386 354 pfam16363
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00812 310 pfam16363
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01228 304 pfam16363
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00207 310 pfam16363
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00744 336 pfam16363
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00701 323 pfam16363
↑ Top




v1.00 @copyright 2026 UCLA