Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Sesp_01913

smpp Syntrophomonas erecta sporosyntropha Sespor
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
pseudouridine synthase
Gene
—
Location
NZ_AP042459.1:2,048,441–2,049,154 (+)   237 aa
Keys
gbid 1576454   gene_oid 8099421310  

Domain architecture

Pfam domain
Pfam signature: pfam01479,pfam00849

Putative operon (same contig + strand, gap ≤ 50 bp)

Sesp_01913 ◀ Sesp_01914 Sesp_01915   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

14 proteins across 8 genomes share architecture group #785  pfam00849,pfam01479

GenomeLocusaaSP/TMPfam order
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00223 304 pfam01479,pfam00849
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01913 ◀ 237 pfam01479,pfam00849
Syntrophomonas curvata DSM15682 / GL#14 Scur_01665 296 pfam01479,pfam00849
Syntrophomonas curvata DSM15682 / GL#14 Scur_01895 240 pfam01479,pfam00849
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00546 304 pfam01479,pfam00849
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01414 237 pfam01479,pfam00849
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01993 244 pfam01479,pfam00849
Syntrophomonas wolfei saponavida / SD2 Sws_00305 238 pfam01479,pfam00849
Syntrophomonas wolfei saponavida / SD2 Sws_02516 303 pfam01479,pfam00849
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01441 305 pfam01479,pfam00849
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01576 239 pfam01479,pfam00849
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01298 305 pfam01479,pfam00849
Syntrophomonas zehnderi OL-4 Szehn Szeh_01722 306 pfam01479,pfam00849
Syntrophomonas zehnderi OL-4 Szehn Szeh_02160 244 pfam01479,pfam00849
↑ Top




v1.00 @copyright 2026 UCLA