Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Sesp_02048

smpp Syntrophomonas erecta sporosyntropha Sespor
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
exodeoxyribonuclease VII small subunit
Gene
xseB
Location
NZ_AP042459.1:2,179,563–2,179,781 (+)   72 aa
Keys
gbid 1576589   gene_oid 8099421456  

Domain architecture

Pfam domain
Pfam signature: pfam02609

Putative operon (same contig + strand, gap ≤ 50 bp)

Sesp_02046 Sesp_02047 Sesp_02048 ◀   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 8 genomes share architecture group #367  pfam02609

GenomeLocusaaSP/TMPfam order
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_02048 ◀ 72 pfam02609
Syntrophomonas curvata DSM15682 / GL#14 Scur_00997 69 pfam02609
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01279 72 pfam02609
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00344 76 pfam02609
Syntrophomonas wolfei saponavida / SD2 Sws_00395 68 pfam02609
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00586 73 pfam02609
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00560 73 pfam02609
Syntrophomonas zehnderi OL-4 Szehn Szeh_01283 73 pfam02609
↑ Top




v1.00 @copyright 2026 UCLA