Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Ser_02058

smpp Syntrophomonas erecta DSM 16215
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
helix-turn-helix transcriptional regulator
Gene
—
Location
NZ_CM128632.1:2,270,404–2,270,634 (−)   76 aa
Keys
gbid 947418   gene_oid 8030288734  

Domain architecture

Pfam domain
Pfam signature: pfam08281

Putative operon (same contig + strand, gap ≤ 50 bp)

Ser_02057 Ser_02058 ◀   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

11 proteins across 7 genomes share architecture group #1425  pfam08281

GenomeLocusaaSP/TMPfam order
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02058 ◀ 76 pfam08281
Syntrophomonas curvata DSM15682 / GL#14 Scur_00167 77 pfam08281
Syntrophomonas curvata DSM15682 / GL#14 Scur_00343 127 pfam08281
Syntrophomonas curvata DSM15682 / GL#14 Scur_00577 141 pfam08281
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01203 76 pfam08281
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01279 77 pfam08281
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01555 86 pfam08281
Syntrophomonas wolfei saponavida / SD2 Sws_01232 78 pfam08281
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00298 161 pfam08281
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02350 153 pfam08281
Syntrophomonas zehnderi OL-4 Szehn Szeh_00447 77 pfam08281
↑ Top




v1.00 @copyright 2026 UCLA