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◀ domain architecture  ·  operons  ·  ❔ guide
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Spalm_01554

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
RNA polymerase sigma factor
Gene
—
Location
NZ_BBCE01000012.1:35,795–36,148 (+)   117 aa
Keys
gbid 1776091   gene_oid 2731400119  

Domain architecture

Pfam domain
Pfam signature: pfam04542

Putative operon (same contig + strand, gap ≤ 50 bp)

Spalm_01554 ◀ Spalm_01555 Spalm_01556   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

11 proteins across 8 genomes share architecture group #330  pfam04542

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01439 127 TM pfam04542
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01554 ◀ 117 pfam04542
Syntrophomonas palmitatica JCM14374 Spalm Spalm_02206 186 pfam04542
Syntrophomonas curvata DSM15682 / GL#14 Scur_01727 234 pfam04542
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00512 243 pfam04542
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00257 243 pfam04542
Syntrophomonas wolfei saponavida / SD2 Sws_02347 243 pfam04542
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00501 136 TM pfam04542
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00492 126 TM pfam04542
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00943 259 pfam04542
Syntrophomonas zehnderi OL-4 Szehn Szeh_00654 133 TM pfam04542
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