Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Ser_00512

smpp Syntrophomonas erecta DSM 16215
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
sigma factor
Gene
—
Location
NZ_CM128632.1:589,334–590,065 (+)   243 aa
Keys
gbid 945863   gene_oid 8030287115  

Domain architecture

Pfam domain
Pfam signature: pfam04542

Putative operon (same contig + strand, gap ≤ 50 bp)

Ser_00512 ◀ Ser_00513   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

11 proteins across 8 genomes share architecture group #330  pfam04542

GenomeLocusaaSP/TMPfam order
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00512 ◀ 243 pfam04542
Syntrophomonas curvata DSM15682 / GL#14 Scur_01727 234 pfam04542
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00257 243 pfam04542
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01439 127 TM pfam04542
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01554 117 pfam04542
Syntrophomonas palmitatica JCM14374 Spalm Spalm_02206 186 pfam04542
Syntrophomonas wolfei saponavida / SD2 Sws_02347 243 pfam04542
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00501 136 TM pfam04542
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00492 126 TM pfam04542
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00943 259 pfam04542
Syntrophomonas zehnderi OL-4 Szehn Szeh_00654 133 TM pfam04542
↑ Top




v1.00 @copyright 2026 UCLA